PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS537378.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 156aa    MW: 17249 Da    PI: 9.5897
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS537378.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.35.5e-08358655
                  HHHHHHHHHHHHHHHHHHHCTSCC.C.......TTS-.STCHHHHHHHHHHHHHHH CS
           HLH  6 nerErrRRdriNsafeeLrellPk.as....kapskK.lsKaeiLekAveYIksLq 55
                  ++r++ RRd+i + + +Lr ++P  ++    + +s      ae L++A  YIk L+
  EcS537378.10  3 PKRDKCRRDNIAELYLKLRPMVPGvCPkvpsRSHSVSyAPRAELLREAFLYIKFLE 58
                  5899********************8779*99666666699*************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.896157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.39E-5361No hitNo description
PfamPF000102.1E-5358IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0017363IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.71E-7566IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-6768IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
DGPKRDKCRR DNIAELYLKL RPMVPGVCPK VPSRSHSVSY APRAELLREA FLYIKFLEEE  60
RVRLEKLKMS SAQVIANSSS ISVALSDSNL AVFAITSSVR RNLVTNIISV FGQHRAEILA  120
ANVMAQDGWM SMTVTASVND VADGAIEKIK QDILMA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010036858.17e-97PREDICTED: uncharacterized protein LOC104425763
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2798023